NIEHS' (Dr.Tom Darden Lab.) collaboration project
Laboratory of Structural Quantitative Biology
NIH/NIEHS (National Institute of Environmetal Health Sciences)
Address: North Carolina
Subjects of collaboration
- Proteins simulations (MD techniques & methodology)
- Smooth Particle-Mesh Ewald for MD Simulations
- Fast Multipoles Method for the Protein Study
Publications
- K. Kholmurodov, W. Smith, K. Yasuoka, and T. Ebisuzaki,
A Highly Vectorised "Link-Cell" FORTRAN Code for
the DL_POLY Molecular Dynamics Simulation Package,
Computer Physics Communications, (2000), 125, 167-192.
- K.Kholmurodov, W.Smith, K.Yasuoka, and T.Ebisuzaki.
Some Optimisations of DL_POLY Molecular Dynamics Simulation Code on the Fujitsu
VPP700.
Proc. High Performance Comput. and Appl., Published by JSPC, Tokyo, Japan, 2000.
- Kholmurodov, K., Smith, W., Yasuoka, K., Darden, T., and Ebisuzaki, T.
A smooth-particle mesh Ewald method for DL_POLY molecular
dynamics simulation package on the Fujitsu VPP700.
Journal of Computational Chemistry, 21 (13): 1187-1191 , 2000.
- CFPP - HOKKE'2000 (IPSJ SIGHPC&SIGARC), March 2000, Hokkaido, Japan
- The Fifteenth International Conference on Nucleation and Atmospheric Aerosols,
University of Missouri-Rolla, 6-11 August 2000.