Some typical outputs of the code Ca3D


Figure 1

A pseudocolored image of the calcium concentrations reached below the membrane. Notice the correlation of the red color with the zones of higher channel density. Each successive image corresponds to the calcium levels at the end of each of the constant calcium pulses (0.4 pA of unitary current) in a train of stimulation consisting of 5 (10 ms) pulses delivered  at 18Hz. Each image gives the averaged calcium concentrations in a time interval of 0.09 ms (approximately)



 
 
 
47 channels 25 channels
Figure 2 

Similarly as in Fig 1, but for a single constant pulse of 0.08 pA of unitary current and 47 channels (left); right figure: 0.15 pA of unitary current and 25 channels. In both cases the duration of the pulse is 50 ms. Notice than the whole current is similar for both animations The successive shots represent average calcium concentrations at the times: 2ms, 4ms,...,50ms.
 
 
time resolution 0.03ms time resolution 0.1ms
Figure 3 

Comparison of Fig. 2 (right) with the same simulation but with a time resolution of 0.03ms
 
 
 
distance(channel,center)  <0.8 microns random and unrestricted distribution of channels
Figure 4 

Comparison of Fig. 2 (left) with a similar simulation but with a channel distributions in which all channels lie closer than 0.8 microns to the center